Publications

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Tuesday, December 6, 2016

k-mer wobble for TP53 signatures

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We analyzed data from 12 - P53 transcripts by following 2765 theoretical k-mers selected because they started with the same two letters in e...
Thursday, December 1, 2016

Predicting Reverse Complements, Inverted Repeats and Mites

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Reverse complements and inverted repeats are one of the most compelling pieces of evidence supporting a Codondex variable k-mer computation....
Tuesday, November 29, 2016

Position (in) iScore Vector exposes Intron - Protein Relationships?

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16,904,172 theoretical k-mers were computed for 12 transcripts of Tp53 downloaded from ensembl . Each transcripts' k-mer set contains 1...
Sunday, November 27, 2016

k-mers, Vectors, ncDNA (Intron) and Protein Relativity

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Following a particular theory of distributed computing, we developed a method using vectors to expose relative differences in the sort ...

A new powerful visualization of DNA intertranscript Sequences

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Visualizations are very important in interpreting and understand data sets. Often with bioinfomatics it is challenging to visualize certain ...

Subsequence Recurrence and Inherent Length Bias

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As reported, using our sequence amplification tool every possible subsequence of a single strand DNA sequence is represented and indepe...

Inclusive DNA sequences - new metrics with Codondex

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Sequence Text Search using Codondex At Codondex one of our central metrics that we have developed is known as iScore. Please see iScore ...